tumourkit.preprocessing.centroidspng2csv
Merges .centroids.csv and .GT_cells.png into .class.csv files.
Copyright (C) 2023 Jose Pérez Cano
This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details.
You should have received a copy of the GNU Affero General Public License along with this program. If not, see <https://www.gnu.org/licenses/>.
Contact information: joseperez2000@hotmail.es
Functions
Converts a PNG file with cell labels and a CSV file with cell centroids into a CSV file associating each cell label with the closest centroid. |
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Extracts the centroids of cells from a labeled image. |
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